STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115054082Histone H3. (136 aa)    
Predicted Functional Partners:
kdm6a
Lysine demethylase 6A.
   
 0.951
ENSENLP00000030550
Lysine (K)-specific demethylase 6B, a.
   
 0.951
LOC115055402
Histone demethylase UTY-like.
   
 0.951
LOC115054700
Uncharacterized LOC115054700.
   
 0.951
ENSENLP00000026836
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.876
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 0.870
dot1l
DOT1 like histone lysine methyltransferase.
   
 0.868
arid4a
AT-rich interaction domain 4A.
   
 0.852
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.852
arid4b
AT-rich interaction domain 4B.
   
 0.852
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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