STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpcpd1Glycerophosphocholine phosphodiesterase 1. (674 aa)    
Predicted Functional Partners:
LOC115056274
Choline kinase alpha-like.
    
 0.937
ENSENLP00000021625
Choline kinase beta.
    
 0.937
ENSENLP00000048360
Patatin-like phospholipase domain containing 6.
  
 
 0.932
ENSENLP00000050823
annotation not available
  
 
 0.932
lypla2
Lysophospholipase 2.
    
 0.931
lypla1
Lysophospholipase 1.
    
 0.931
CHAT
Choline O-acetyltransferase-like.
     
 0.928
nhej1
Non-homologous end joining factor 1.
    
 0.925
ENSENLP00000052730
Cyclin Pas1/PHO80 domain containing 1.
    
 0.925
ache
Acetylcholinesterase (Cartwright blood group).
    
 0.922
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.