STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000028232Zinc finger, matrin-type 3. (314 aa)    
Predicted Functional Partners:
LOC115042540
Radial spoke head protein 4 homolog A-like.
   
    0.601
ENSENLP00000005122
Dynein, axonemal, intermediate chain 1, paralog 2.
   
    0.601
mitd1
Microtubule interacting and trafficking domain containing 1.
   
    0.539
ENSENLP00000016141
Monoamine oxidase.
   
    0.537
LOC115052354
Probable flavin-containing monoamine oxidase A.
   
    0.537
smim12
Small integral membrane protein 12.
   
    0.424
ENSENLP00000045117
Neuronal PAS domain protein 4 like.
   
    0.422
ENSENLP00000054468
Neuronal PAS domain protein 4a.
   
    0.422
mtx2
Metaxin 2.
   
    0.418
utp15
UTP15 small subunit processome component.
   
    0.416
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.