STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc4a11Solute carrier family 4 member 11. (842 aa)    
Predicted Functional Partners:
kctd2
Potassium channel tetramerization domain containing 2.
   
 0.555
LOC115043973
Macrophage-stimulating protein receptor-like.
    
  0.484
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.484
mst1r
Macrophage stimulating 1 receptor.
    
  0.484
ripk4
Receptor interacting serine/threonine kinase 4.
    
  0.482
ENSENLP00000020722
Rho GTPase activating protein 1.
     
 0.475
ENSENLP00000014277
Katanin p60 subunit A-like 2.
    
 0.449
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
  0.448
LOC115060190
Vesicle-fusing ATPase-like.
    
  0.448
vcp
Valosin containing protein.
    
  0.439
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.