STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgrn1Mahogunin ring finger 1. (549 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor.
     
 0.901
ankrd46
Ankyrin repeat domain 46.
    
   0.711
atrn
Attractin.
   
 
 0.678
ENSENLP00000025139
annotation not available
   
 
 0.678
atrnl1
Attractin like 1.
   
 
 0.678
ENSENLP00000042224
Multiple EGF-like-domains 8.
   
 
 0.678
mc1r
Melanocortin 1 receptor.
    
 
 0.664
tsg101
Tumor susceptibility 101.
    
 
 0.593
ENSENLP00000021869
annotation not available
    
 
 0.593
polr3k
RNA polymerase III subunit K.
      
 0.524
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.