STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncbp2Nuclear cap binding protein subunit 2. (164 aa)    
Predicted Functional Partners:
snrpc
Small nuclear ribonucleoprotein polypeptide C.
    
 0.999
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.999
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.998
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.998
snrpd1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.997
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 0.997
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.996
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.996
sf3b3
Splicing factor 3b subunit 3.
    
 0.994
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.991
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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