STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115035246Krueppel-like factor 5. (439 aa)    
Predicted Functional Partners:
ENSENLP00000002636
CCAAT enhancer binding protein beta.
    
 0.736
cebpd
CCAAT enhancer binding protein delta.
    
 0.730
LOC115056053
NEDD4-like E3 ubiquitin-protein ligase WWP2.
    
 0.668
ENSENLP00000046272
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.668
LOC115046946
Histone acetyltransferase p300-like.
    
 0.658
LOC115059670
Histone acetyltransferase p300-like.
    
 0.658
ENSENLP00000046858
annotation not available
    
  0.623
ENSENLP00000046868
annotation not available
    
  0.623
ENSENLP00000053539
BRCA1 associated RING domain 1.
    
 0.620
ENSENLP00000048193
annotation not available
    
 0.616
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.