STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sox8SRY-box transcription factor 8. (468 aa)    
Predicted Functional Partners:
ctnnb1
Catenin beta 1.
    
 0.749
egr2
Early growth response 2.
    
 0.747
runx2
RUNX family transcription factor 2.
   
 0.724
runx3
RUNX family transcription factor 3.
   
 0.720
LOC115051931
Runt-related transcription factor 1-like.
   
 0.720
ENSENLP00000020972
annotation not available
   
 0.649
nr5a2
Nuclear receptor subfamily 5 group A member 2.
    
 0.649
LOC115052178
POU domain, class 5, transcription factor 1-like.
    
 0.642
nr5a1
Nuclear receptor subfamily 5 group A member 1.
    
 0.640
LOC115048486
Doublesex- and mab-3-related transcription factor 1-like.
    
 0.590
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.