STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000032073annotation not available (480 aa)    
Predicted Functional Partners:
ENSENLP00000004347
Ubiquitin B.
    
  0.629
rps27a
Ribosomal protein S27a.
    
  0.624
ifih1
Interferon induced with helicase C domain 1.
   
 0.543
dhx58
DExH-box helicase 58.
   
  0.516
LOC115051662
Ubiquitin-conjugating enzyme E2 L3-like.
    
  0.510
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
 0.505
ENSENLP00000035060
annotation not available
    
  0.505
LOC115053350
Caspase-1-like.
   
 0.503
zfand4
Zinc finger AN1-type containing 4.
    
  0.500
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.492
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.