STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115040789threonine--tRNA ligase, cytoplasmic-like. (805 aa)    
Predicted Functional Partners:
LOC115044516
threonine--tRNA ligase, cytoplasmic-like.
  
  
 
0.915
LOC115049296
threonine--tRNA ligase, cytoplasmic.
  
  
 
0.913
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.875
mlst8
MTOR associated protein, LST8 homolog.
   
 0.871
ENSENLP00000000059
Mitochondrial translational initiation factor 2.
  
 0.867
yars1
tyrosyl-tRNA synthetase 1.
  
 
 0.856
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.853
mtor
Mechanistic target of rapamycin kinase.
    
 0.849
mrps15
Mitochondrial ribosomal protein S15.
  
 
 0.845
ENSENLP00000008432
Mitochondrial ribosomal protein L22.
   
 
 0.834
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.