STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115057221Tctex1 domain-containing protein 1-B-like. (177 aa)    
Predicted Functional Partners:
dynlt1
Dynein light chain Tctex-type 1.
    
 0.984
ENSENLP00000047697
Dynein, cytoplasmic 2, light intermediate chain 1.
   
 0.971
wdr34
WD repeat domain 34.
    
 0.970
ENSENLP00000050695
WD repeat domain 60.
    
 0.969
DYNLT3
Dynein light chain Tctex-type 3.
    
 0.964
ENSENLP00000037510
Dynein, light chain, Tctex-type 3.
    
 0.964
dynlrb1
Dynein light chain roadblock-type 1.
   
 0.956
dynlrb2
Dynein light chain roadblock-type 2.
   
 0.956
tctex1d2
Tctex1 domain containing 2.
     
0.933
DYNLL2
Dynein light chain LC8-type 2.
    
 0.927
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.