STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115055333Calpain-2 catalytic subunit-like. (709 aa)    
Predicted Functional Partners:
LOC115040658
Talin-2-like.
    
 0.883
ENSENLP00000033413
Talin 1.
    
 0.883
tln2
Talin 2.
    
 0.883
cast
Calpastatin.
   
 0.861
LOC115040951
Apoptosis regulator BAX-like.
   
  0.860
ENSENLP00000036946
Calpain 2, (m/II) large subunit, like.
  
  
 
0.839
bax
BCL2 associated X, apoptosis regulator.
    
  0.836
LOC115047450
Apoptosis regulator BAX-like.
    
  0.774
ENSENLP00000004985
Calpain, small subunit 1 b.
   
0.764
CAPNS1
Calpain small subunit 1-like.
   
0.764
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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