STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cxxc1CXXC finger protein 1. (588 aa)    
Predicted Functional Partners:
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.996
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.996
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.993
setd1a
SET domain containing 1A, histone lysine methyltransferase.
   
 0.992
setd1b
SET domain containing 1B, histone lysine methyltransferase.
   
 0.992
twf2
Twinfilin actin binding protein 2.
    
 0.983
LOC115043293
WD repeat-containing protein 82-like.
    
 0.983
LOC115051609
WD repeat-containing protein 5.
   
 0.940
LOC115049222
WD repeat-containing protein 5-like.
   
 0.940
ENSENLP00000012787
CXXC finger protein 1a.
  
  
 
0.922
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.