STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mysm1Myb like, SWIRM and MPN domains 1. (873 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
kat2a
Lysine acetyltransferase 2A.
    
 0.997
ENSENLP00000004347
Ubiquitin B.
    
 0.997
LOC115055238
Core histone macro-H2A.2.
  
 0.997
ENSENLP00000015531
K(lysine) acetyltransferase 2B.
    
 0.997
LOC115056530
Cat eye syndrome critical region protein 2 homolog.
    
 0.997
ENSENLP00000022805
ISG15 ubiquitin like modifier.
    
 0.997
ENSENLP00000022822
ISG15 ubiquitin like modifier.
    
 0.997
LOC115058742
Polyubiquitin-like.
    
 0.997
zfand4
Zinc finger AN1-type containing 4.
   
 0.997
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.