STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmeb2Glucocorticoid modulatory element binding protein 2. (527 aa)    
Predicted Functional Partners:
usp40
Ubiquitin specific peptidase 40.
    
 
 0.561
chd1l
Chromodomain helicase DNA binding protein 1 like.
   
 
 0.479
wdr61
WD repeat domain 61.
      
 0.473
LOC115058672
Dehydrogenase/reductase SDR family member 4-like.
    
   0.437
ENSENLP00000011894
annotation not available
    
   0.410
cask
Calcium/calmodulin dependent serine protein kinase.
    
   0.410
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.