STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd16aAbhydrolase domain containing 16A. (550 aa)    
Predicted Functional Partners:
hm13
Histocompatibility minor 13.
   
 
 0.553
RNF5
Ring finger protein 5.
    
 
 0.540
ENSENLP00000011640
Phosphatidylserine decarboxylase.
      
 0.509
ENSENLP00000049343
ATP synthase membrane subunit c locus 3b.
    
 
 0.500
abhd3
Abhydrolase domain containing 3.
      
 0.474
ENSENLP00000011156
Abhydrolase domain containing 12.
      
 0.473
abhd11
Abhydrolase domain containing 11.
      
 0.455
ENSENLP00000024481
Prolyl endopeptidase.
      
 0.455
ENSENLP00000043222
Intraflagellar transport 81 homolog.
      
 0.451
ENSENLP00000039801
Ring finger protein 185.
    
 
 0.443
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.