STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000036970PTPRF interacting protein alpha 4. (728 aa)    
Predicted Functional Partners:
ENSENLP00000022016
annotation not available
 
  
 
 0.879
cask
Calcium/calmodulin dependent serine protein kinase.
    
 0.871
ENSENLP00000011894
annotation not available
    
 0.866
ENSENLP00000020194
annotation not available
    
 0.825
ENSENLP00000020206
annotation not available
    
 0.825
ENSENLP00000031887
annotation not available
    
 0.825
ENSENLP00000024740
annotation not available
 
     0.822
ENSENLP00000036978
annotation not available
 
     0.808
mpp1
Membrane palmitoylated protein 1.
    
 0.794
ENSENLP00000006271
annotation not available
   
 0.741
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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