STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdprPyruvate dehydrogenase phosphatase regulatory subunit. (891 aa)    
Predicted Functional Partners:
gcsh
Glycine cleavage system protein H.
  
 0.984
LOC115041280
Glycine cleavage system H protein, mitochondrial-like.
  
 0.984
gldc
Glycine decarboxylase.
  
 0.983
gart
annotation not available
  
 
 0.973
pipox
Pipecolic acid and sarcosine oxidase.
  
0.945
ENSENLP00000023112
D-amino-acid oxidase, tandem duplicate 2.
  
 0.928
ddo
D-aspartate oxidase.
  
 0.913
acad8
acyl-CoA dehydrogenase family member 8.
  
 0.910
acadm
acyl-CoA dehydrogenase medium chain.
  
 0.910
shmt2
Serine hydroxymethyltransferase 2.
  
 0.895
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.