STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trmt2btRNA methyltransferase 2 homolog B. (494 aa)    
Predicted Functional Partners:
trmt61a
tRNA methyltransferase 61A.
   
  
 0.872
tbl3
Transducin beta like 3.
   
    0.837
bop1
BOP1 ribosomal biogenesis factor.
   
    0.827
cep152
Centrosomal protein 152.
   
    0.827
rpf2
Ribosome production factor 2 homolog.
   
  
 0.804
trmt61b
tRNA methyltransferase 61B.
   
  
 0.791
ENSENLP00000037097
DEAD (Asp-Glu-Ala-Asp) box polypeptide 54.
  
    0.791
tsen54
tRNA splicing endonuclease subunit 54.
   
    0.780
nat10
N-acetyltransferase 10.
  
    0.780
UTP18
UTP18 small subunit processome component.
   
    0.773
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.