STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115036807Beta-2-microglobulin-like. (118 aa)    
Predicted Functional Partners:
rpa3
Replication protein A3.
   
 0.988
ENSENLP00000024951
annotation not available
   
 0.986
LOC115052984
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.976
RPA1
Replication protein A 70 kDa DNA-binding subunit-like.
   
 0.976
ENSENLP00000011398
RAD52 homolog, DNA repair protein.
    
 0.967
prim2
DNA primase subunit 2.
   
 0.962
tapbp
TAP binding protein.
   
 0.959
ENSENLP00000047936
ATR serine/threonine kinase.
   
 0.959
ENSENLP00000008224
Xeroderma pigmentosum, complementation group A.
    
 0.955
smarcal1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1.
   
 0.955
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.