LOC115036959 protein (Echeneis naucrates) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC115036959

Leucine-rich repeat neuronal protein 3-like. (708 aa)

Predicted Functional Partners:

ENSENLP00000007698

0.774

ENSENLP00000034280

0.774

ENSENLP00000040328

0.774

adgrl2

0.774

ENSENLP00000042433

0.774

LOC115040319

0.774

ADGRL3

0.774

ENSENLP00000049292

0.754

ntng1

0.754

ENSENLP00000011894

0.667

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADGRL3	LOC115036959	ENSENLP00000054653	ENSENLP00000040626	Adhesion G protein-coupled receptor L3.	Leucine-rich repeat neuronal protein 3-like.	0.774
ENSENLP00000007698	LOC115036959	ENSENLP00000007698	ENSENLP00000040626	annotation not available	Leucine-rich repeat neuronal protein 3-like.	0.774
ENSENLP00000011894	LOC115036959	ENSENLP00000011894	ENSENLP00000040626	annotation not available	Leucine-rich repeat neuronal protein 3-like.	0.667
ENSENLP00000034280	LOC115036959	ENSENLP00000034280	ENSENLP00000040626	Adhesion G protein-coupled receptor L1a.	Leucine-rich repeat neuronal protein 3-like.	0.774
ENSENLP00000040328	LOC115036959	ENSENLP00000040328	ENSENLP00000040626	Si:ch1073-186i23.1.	Leucine-rich repeat neuronal protein 3-like.	0.774
ENSENLP00000042433	LOC115036959	ENSENLP00000042433	ENSENLP00000040626	annotation not available	Leucine-rich repeat neuronal protein 3-like.	0.774
ENSENLP00000049292	LOC115036959	ENSENLP00000049292	ENSENLP00000040626	Vav 3 guanine nucleotide exchange factor b.	Leucine-rich repeat neuronal protein 3-like.	0.754
ENSENLP00000049292	ntng1	ENSENLP00000049292	ENSENLP00000050206	Vav 3 guanine nucleotide exchange factor b.	Netrin G1.	0.582
LOC115036959	ADGRL3	ENSENLP00000040626	ENSENLP00000054653	Leucine-rich repeat neuronal protein 3-like.	Adhesion G protein-coupled receptor L3.	0.774
LOC115036959	ENSENLP00000007698	ENSENLP00000040626	ENSENLP00000007698	Leucine-rich repeat neuronal protein 3-like.	annotation not available	0.774
LOC115036959	ENSENLP00000011894	ENSENLP00000040626	ENSENLP00000011894	Leucine-rich repeat neuronal protein 3-like.	annotation not available	0.667
LOC115036959	ENSENLP00000034280	ENSENLP00000040626	ENSENLP00000034280	Leucine-rich repeat neuronal protein 3-like.	Adhesion G protein-coupled receptor L1a.	0.774
LOC115036959	ENSENLP00000040328	ENSENLP00000040626	ENSENLP00000040328	Leucine-rich repeat neuronal protein 3-like.	Si:ch1073-186i23.1.	0.774
LOC115036959	ENSENLP00000042433	ENSENLP00000040626	ENSENLP00000042433	Leucine-rich repeat neuronal protein 3-like.	annotation not available	0.774
LOC115036959	ENSENLP00000049292	ENSENLP00000040626	ENSENLP00000049292	Leucine-rich repeat neuronal protein 3-like.	Vav 3 guanine nucleotide exchange factor b.	0.754
LOC115036959	LOC115040319	ENSENLP00000040626	ENSENLP00000048515	Leucine-rich repeat neuronal protein 3-like.	Adhesion G protein-coupled receptor L3-like.	0.774
LOC115036959	adgrl2	ENSENLP00000040626	ENSENLP00000040849	Leucine-rich repeat neuronal protein 3-like.	Adhesion G protein-coupled receptor L2.	0.774
LOC115036959	ntng1	ENSENLP00000040626	ENSENLP00000050206	Leucine-rich repeat neuronal protein 3-like.	Netrin G1.	0.754
LOC115040319	LOC115036959	ENSENLP00000048515	ENSENLP00000040626	Adhesion G protein-coupled receptor L3-like.	Leucine-rich repeat neuronal protein 3-like.	0.774
adgrl2	LOC115036959	ENSENLP00000040849	ENSENLP00000040626	Adhesion G protein-coupled receptor L2.	Leucine-rich repeat neuronal protein 3-like.	0.774