STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfhx3Zinc finger homeobox 3. (3880 aa)    
Predicted Functional Partners:
runx3
RUNX family transcription factor 3.
     
 0.712
LOC115051931
Runt-related transcription factor 1-like.
     
 0.711
runx2
RUNX family transcription factor 2.
     
 0.711
ENSENLP00000020972
annotation not available
     
 0.700
LOC115052952
Transforming growth factor beta-1 proprotein-like.
    
  0.664
ENSENLP00000014518
annotation not available
    
  0.664
LOC115037532
Transforming growth factor beta-3 proprotein-like.
    
  0.661
bend3
BEN domain containing 3.
    
  0.490
med12
Mediator complex subunit 12.
      
 0.487
LOC115035572
Ataxin-3-like.
      
 0.483
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.