STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115052407WW domain-binding protein 1-like. (285 aa)    
Predicted Functional Partners:
ruvbl1
RuvB like AAA ATPase 1.
    
 0.893
ruvbl2
RuvB like AAA ATPase 2.
    
 0.892
actr5
Actin related protein 5.
    
 0.890
ino80c
INO80 complex subunit C.
    
 0.853
actr8
Actin related protein 8.
    
 0.754
actl6a
Actin like 6A.
    
 0.690
ENSENLP00000033778
VOPP1 WW domain binding protein.
      
 0.577
ENSENLP00000051699
Cysteine/tyrosine-rich 1.
      
 0.571
cfdp1
Craniofacial development protein 1.
   
 
  0.529
vps72
Vacuolar protein sorting 72 homolog.
   
 
  0.520
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.