STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm12PR/SET domain 12. (373 aa)    
Predicted Functional Partners:
suv39h1
Suppressor of variegation 3-9 homolog 1.
    
 0.639
setd7
SET domain containing 7, histone lysine methyltransferase.
    
 0.620
LOC115060006
Histone-lysine N-methyltransferase PRDM9-like.
    
 
0.595
ENSENLP00000033636
Lysine (K)-specific methyltransferase 2E.
     
 0.576
kmt5a
Lysine methyltransferase 5A.
    
 0.568
xkrx
XK related X-linked.
   
 0.568
nox1
NADPH oxidase 1.
   
 0.568
ENSENLP00000015805
annotation not available
   
 0.568
xk
X-linked Kx blood group.
   
 0.568
LOC115054391
Cytochrome b-245 heavy chain-like.
   
 0.568
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.