STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115045562Toll-like receptor 3. (912 aa)    
Predicted Functional Partners:
LOC115057864
TIR domain-containing adapter molecule 1-like.
   
 0.969
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.931
unc93b1
Unc-93 homolog B1, TLR signaling regulator.
    
 0.925
ENSENLP00000033621
Transmembrane p24 trafficking protein 7.
   
 0.919
traf6
TNF receptor associated factor 6.
   
 0.908
tirap
TIR domain containing adaptor protein.
   
 0.828
ENSENLP00000052192
Interleukin-1 receptor-associated kinase 4.
   
 0.812
ripk1
Receptor interacting serine/threonine kinase 1.
   
 0.778
irak1
Interleukin 1 receptor associated kinase 1.
    
 0.762
ENSENLP00000007698
annotation not available
   
  0.761
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.