STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000042083annotation not available (215 aa)    
Predicted Functional Partners:
WDR33
WD repeat domain 33.
   
 0.985
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.984
ENSENLP00000026065
Cleavage and polyadenylation specific factor 1.
    
 0.984
cpsf2
Cleavage and polyadenylation specific factor 2.
    
 0.984
fip1l1
Factor interacting with PAPOLA and CPSF1.
    
 0.982
papolg
poly(A) polymerase gamma.
    
 0.982
sympk
Symplekin.
    
 0.982
ENSENLP00000015634
annotation not available
    
 0.979
pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.978
LOC115037755
Cleavage and polyadenylation specificity factor subunit 3-like.
    
 0.956
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.