STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000042669Rho guanine nucleotide exchange factor (GEF) 1b. (731 aa)    
Predicted Functional Partners:
LOC115047963
Guanine nucleotide-binding protein subunit alpha-13.
    
 0.969
gna12
G protein subunit alpha 12.
    
 0.969
LOC115060349
Guanine nucleotide-binding protein subunit alpha-13-like.
    
 0.969
LOC115045999
Rho-related GTP-binding protein RhoA-B-like.
   
 0.961
LOC115045826
Rho-related GTP-binding protein RhoA-C-like.
   
 0.961
LOC115043306
Transforming protein RhoA.
   
 0.948
RHOB
Ras homolog family member B.
   
 0.948
ENSENLP00000028029
Rho guanine nucleotide exchange factor (GEF) 12a.
  
  
 
0.914
LOC115061946
Rho guanine nucleotide exchange factor 7-like.
    
 0.911
arhgef6
Rac/Cdc42 guanine nucleotide exchange factor 6.
    
 0.911
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.