Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHMT2 | amt | ENSENLP00000018810 | ENSENLP00000003973 | Serine hydroxymethyltransferase, mitochondrial-like. | Aminomethyltransferase. | 0.977 |
SHMT2 | atic | ENSENLP00000018810 | ENSENLP00000053260 | Serine hydroxymethyltransferase, mitochondrial-like. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.994 |
SHMT2 | gart | ENSENLP00000018810 | ENSENLP00000003512 | Serine hydroxymethyltransferase, mitochondrial-like. | annotation not available | 0.999 |
SHMT2 | gldc | ENSENLP00000018810 | ENSENLP00000042344 | Serine hydroxymethyltransferase, mitochondrial-like. | Glycine decarboxylase. | 0.989 |
SHMT2 | mtfmt | ENSENLP00000018810 | ENSENLP00000041988 | Serine hydroxymethyltransferase, mitochondrial-like. | Mitochondrial methionyl-tRNA formyltransferase. | 0.949 |
SHMT2 | mthfd2l | ENSENLP00000018810 | ENSENLP00000043056 | Serine hydroxymethyltransferase, mitochondrial-like. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like. | 0.987 |
SHMT2 | mthfr | ENSENLP00000018810 | ENSENLP00000019317 | Serine hydroxymethyltransferase, mitochondrial-like. | Methylenetetrahydrofolate reductase. | 0.969 |
SHMT2 | shmt1 | ENSENLP00000018810 | ENSENLP00000007339 | Serine hydroxymethyltransferase, mitochondrial-like. | Serine hydroxymethyltransferase 1. | 0.903 |
SHMT2 | shmt2 | ENSENLP00000018810 | ENSENLP00000002106 | Serine hydroxymethyltransferase, mitochondrial-like. | Serine hydroxymethyltransferase 2. | 0.902 |
SHMT2 | tyms | ENSENLP00000018810 | ENSENLP00000048292 | Serine hydroxymethyltransferase, mitochondrial-like. | Thymidylate synthetase. | 0.957 |
amt | SHMT2 | ENSENLP00000003973 | ENSENLP00000018810 | Aminomethyltransferase. | Serine hydroxymethyltransferase, mitochondrial-like. | 0.977 |
amt | atic | ENSENLP00000003973 | ENSENLP00000053260 | Aminomethyltransferase. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.962 |
amt | gart | ENSENLP00000003973 | ENSENLP00000003512 | Aminomethyltransferase. | annotation not available | 0.978 |
amt | gldc | ENSENLP00000003973 | ENSENLP00000042344 | Aminomethyltransferase. | Glycine decarboxylase. | 0.999 |
amt | mtfmt | ENSENLP00000003973 | ENSENLP00000041988 | Aminomethyltransferase. | Mitochondrial methionyl-tRNA formyltransferase. | 0.940 |
amt | mthfd2l | ENSENLP00000003973 | ENSENLP00000043056 | Aminomethyltransferase. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like. | 0.990 |
amt | mthfr | ENSENLP00000003973 | ENSENLP00000019317 | Aminomethyltransferase. | Methylenetetrahydrofolate reductase. | 0.958 |
amt | shmt1 | ENSENLP00000003973 | ENSENLP00000007339 | Aminomethyltransferase. | Serine hydroxymethyltransferase 1. | 0.977 |
amt | shmt2 | ENSENLP00000003973 | ENSENLP00000002106 | Aminomethyltransferase. | Serine hydroxymethyltransferase 2. | 0.977 |
amt | tyms | ENSENLP00000003973 | ENSENLP00000048292 | Aminomethyltransferase. | Thymidylate synthetase. | 0.942 |
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