STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxnad1Oxidoreductase NAD binding domain containing 1. (310 aa)    
Predicted Functional Partners:
dhodh
Dihydroorotate dehydrogenase (quinone).
  
 0.988
ENSENLP00000039570
Dihydropyrimidine dehydrogenase b.
  
 0.988
umps
Uridine monophosphate synthetase.
  
 
 0.977
golt1b
Golgi transport 1B.
  
 
 0.926
ENSENLP00000043834
Golgi transport 1Bb.
  
 
 0.926
FADS6
Fatty acid desaturase 6.
  
 0.924
ENSENLP00000028823
annotation not available
  
 0.924
tmem116
Transmembrane protein 116.
  
 0.889
ENSENLP00000011990
G protein-coupled receptor 143.
  
 0.889
LOC115056328
Uncharacterized LOC115056328.
  
 0.889
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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