STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000043493Oogenesis-related gene. (221 aa)    
Predicted Functional Partners:
rag1
Recombination activating 1.
      
 0.596
LOC115041902
Transcription factor AP-1-like.
      
 0.572
LOC115045775
Rhodopsin.
      
 0.531
RHO
Rhodopsin.
      
 0.530
mvk
Mevalonate kinase.
      
 0.518
ell
Elongation factor for RNA polymerase II.
      
 0.511
ENSENLP00000008585
JunE proto-oncogene, AP-1 transcription factor subunit.
      
 0.475
LOC115038010
Heme-binding protein 1-like.
      
 0.473
ENSENLP00000038608
SET binding factor 1.
      
 0.455
ENSENLP00000002671
annotation not available
   
  
 0.452
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.