STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tsnTranslin. (227 aa)    
Predicted Functional Partners:
tsnax
Translin associated factor X.
  
0.999
dicer1
Dicer 1, ribonuclease III.
   
 
 0.960
drosha
Drosha ribonuclease III.
   
 
 0.947
rpp38
Ribonuclease P/MRP subunit p38.
   
 
  0.932
ENSENLP00000026100
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.927
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 
  0.923
mrpl44
Mitochondrial ribosomal protein L44.
   
 
 0.866
snu13
Small nuclear ribonucleoprotein 13.
   
 
  0.849
tarbp2
TARBP2 subunit of RISC loading complex.
   
 
 0.842
prkra
Protein activator of interferon induced protein kinase EIF2AK2.
   
 
 0.842
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.