STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcdh7Protocadherin 7. (1253 aa)    
Predicted Functional Partners:
fjx1
Four-jointed box kinase 1.
   
 0.590
LOC115049769
Junction plakoglobin-like.
    
  0.555
ENSENLP00000044726
annotation not available
    
  0.555
anln
Anillin actin binding protein.
    
  0.551
aplp2
Amyloid beta precursor like protein 2.
    
  0.538
LOC115035663
Mitochondrial amidoxime-reducing component 1-like.
    
  0.538
ENSENLP00000044301
Mitochondrial amidoxime reducing component 1.
    
  0.538
LOC115048341
LHFPL tetraspan subfamily member 2a protein-like.
    
  0.535
lhfpl2
LHFPL tetraspan subfamily member 2.
    
  0.535
fat1
FAT atypical cadherin 1.
    
 
0.520
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.