Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC115060674 | egfr | ENSENLP00000027191 | ENSENLP00000037057 | Melanoma receptor tyrosine-protein kinase-like. | Epidermal growth factor receptor. | 0.914 |
LOC115060674 | erbb2 | ENSENLP00000027191 | ENSENLP00000048344 | Melanoma receptor tyrosine-protein kinase-like. | Erb-b2 receptor tyrosine kinase 2. | 0.919 |
LOC115060674 | grb2 | ENSENLP00000027191 | ENSENLP00000021383 | Melanoma receptor tyrosine-protein kinase-like. | Growth factor receptor bound protein 2. | 0.983 |
LOC115060674 | kdr | ENSENLP00000027191 | ENSENLP00000016184 | Melanoma receptor tyrosine-protein kinase-like. | Kinase insert domain receptor. | 0.683 |
LOC115060674 | pdgfra | ENSENLP00000027191 | ENSENLP00000009796 | Melanoma receptor tyrosine-protein kinase-like. | Platelet derived growth factor receptor alpha. | 0.871 |
LOC115060674 | pdgfrb | ENSENLP00000027191 | ENSENLP00000006512 | Melanoma receptor tyrosine-protein kinase-like. | Platelet derived growth factor receptor beta. | 0.873 |
LOC115060674 | plcg2 | ENSENLP00000027191 | ENSENLP00000045670 | Melanoma receptor tyrosine-protein kinase-like. | Phospholipase C gamma 2. | 0.960 |
LOC115060674 | syk | ENSENLP00000027191 | ENSENLP00000028077 | Melanoma receptor tyrosine-protein kinase-like. | Spleen associated tyrosine kinase. | 0.502 |
LOC115061708 | erbb2 | ENSENLP00000053928 | ENSENLP00000048344 | Receptor tyrosine-protein kinase erbB-4-like. | Erb-b2 receptor tyrosine kinase 2. | 0.872 |
LOC115061708 | grb2 | ENSENLP00000053928 | ENSENLP00000021383 | Receptor tyrosine-protein kinase erbB-4-like. | Growth factor receptor bound protein 2. | 0.981 |
LOC115061708 | kdr | ENSENLP00000053928 | ENSENLP00000016184 | Receptor tyrosine-protein kinase erbB-4-like. | Kinase insert domain receptor. | 0.680 |
LOC115061708 | pdgfra | ENSENLP00000053928 | ENSENLP00000009796 | Receptor tyrosine-protein kinase erbB-4-like. | Platelet derived growth factor receptor alpha. | 0.759 |
LOC115061708 | pdgfrb | ENSENLP00000053928 | ENSENLP00000006512 | Receptor tyrosine-protein kinase erbB-4-like. | Platelet derived growth factor receptor beta. | 0.780 |
LOC115061708 | plcg2 | ENSENLP00000053928 | ENSENLP00000045670 | Receptor tyrosine-protein kinase erbB-4-like. | Phospholipase C gamma 2. | 0.955 |
LOC115061708 | syk | ENSENLP00000053928 | ENSENLP00000028077 | Receptor tyrosine-protein kinase erbB-4-like. | Spleen associated tyrosine kinase. | 0.502 |
egfr | LOC115060674 | ENSENLP00000037057 | ENSENLP00000027191 | Epidermal growth factor receptor. | Melanoma receptor tyrosine-protein kinase-like. | 0.914 |
egfr | erbb2 | ENSENLP00000037057 | ENSENLP00000048344 | Epidermal growth factor receptor. | Erb-b2 receptor tyrosine kinase 2. | 0.918 |
egfr | grb2 | ENSENLP00000037057 | ENSENLP00000021383 | Epidermal growth factor receptor. | Growth factor receptor bound protein 2. | 0.983 |
egfr | kdr | ENSENLP00000037057 | ENSENLP00000016184 | Epidermal growth factor receptor. | Kinase insert domain receptor. | 0.683 |
egfr | pdgfra | ENSENLP00000037057 | ENSENLP00000009796 | Epidermal growth factor receptor. | Platelet derived growth factor receptor alpha. | 0.895 |
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