STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vps33bVPS33B late endosome and lysosome associated. (616 aa)    
Predicted Functional Partners:
ENSENLP00000041349
VPS39 subunit of HOPS complex.
   
 0.997
vps18
VPS18 core subunit of CORVET and HOPS complexes.
   
 0.997
vps11
VPS11 core subunit of CORVET and HOPS complexes.
   
 0.996
vps41
VPS41 subunit of HOPS complex.
    
 0.996
ENSENLP00000031950
VPS8 subunit of CORVET complex.
    
 0.994
ENSENLP00000051879
VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog.
   
 0.994
stx17
Syntaxin 17.
    
 0.985
vamp7
Vesicle associated membrane protein 7.
    
 0.983
tgfbrap1
Transforming growth factor beta receptor associated protein 1.
   
 0.981
ENSENLP00000046656
Si:ch211-266g18.9.
   
 0.979
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.