STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c11h1orf109Chromosome 11 C1orf109 homolog. (202 aa)    
Predicted Functional Partners:
rubcnl
Rubicon like autophagy enhancer.
   
    0.861
cwc25
CWC25 spliceosome associated protein homolog.
   
    0.861
calhm2
Calcium homeostasis modulator family member 2.
   
    0.850
ftsj1
FtsJ RNA 2'-O-methyltransferase 1.
   
    0.821
cinp
Cyclin dependent kinase 2 interacting protein.
    
 
 0.808
LOC115058393
Acyl-coenzyme A thioesterase 11-like.
   
    0.807
LIX1L
Limb and CNS expressed 1 like.
   
    0.807
acot11
acyl-CoA thioesterase 11.
   
    0.807
ENSENLP00000048592
Limb and CNS expressed 1.
   
    0.807
mocs3
Molybdenum cofactor synthesis 3.
   
    0.805
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.