ENSENLP00000047986 protein (Echeneis naucrates)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSENLP00000047986

F-box protein 36a. (185 aa)

Predicted Functional Partners:

ENSENLP00000049820

0.908

nae1

0.665

LOC115058487

0.643

LOC115057126

0.643

UBA3

0.638

ENSENLP00000015432

0.638

CUL3

0.612

cacul1

0.612

LOC115053551

0.612

cul1

0.612

Your Current Organism:

Echeneis naucrates

NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	ENSENLP00000015432	ENSENLP00000006060	ENSENLP00000015432	Cullin-3-like.	Ubiquitin-like modifier activating enzyme 3.	0.826
CUL3	ENSENLP00000047986	ENSENLP00000006060	ENSENLP00000047986	Cullin-3-like.	F-box protein 36a.	0.612
CUL3	ENSENLP00000049820	ENSENLP00000006060	ENSENLP00000049820	Cullin-3-like.	S-phase kinase-associated protein 1.	0.985
CUL3	LOC115053551	ENSENLP00000006060	ENSENLP00000007466	Cullin-3-like.	Cullin-3.	0.913
CUL3	LOC115057126	ENSENLP00000006060	ENSENLP00000050283	Cullin-3-like.	NEDD8-like.	0.955
CUL3	LOC115058487	ENSENLP00000006060	ENSENLP00000025903	Cullin-3-like.	NEDD8.	0.955
CUL3	UBA3	ENSENLP00000006060	ENSENLP00000010377	Cullin-3-like.	NEDD8-activating enzyme E1 catalytic subunit-like.	0.826
CUL3	cul1	ENSENLP00000006060	ENSENLP00000033221	Cullin-3-like.	Cullin 1.	0.767
CUL3	nae1	ENSENLP00000006060	ENSENLP00000053435	Cullin-3-like.	NEDD8 activating enzyme E1 subunit 1.	0.837
ENSENLP00000015432	CUL3	ENSENLP00000015432	ENSENLP00000006060	Ubiquitin-like modifier activating enzyme 3.	Cullin-3-like.	0.826
ENSENLP00000015432	ENSENLP00000047986	ENSENLP00000015432	ENSENLP00000047986	Ubiquitin-like modifier activating enzyme 3.	F-box protein 36a.	0.638
ENSENLP00000015432	ENSENLP00000049820	ENSENLP00000015432	ENSENLP00000049820	Ubiquitin-like modifier activating enzyme 3.	S-phase kinase-associated protein 1.	0.808
ENSENLP00000015432	LOC115053551	ENSENLP00000015432	ENSENLP00000007466	Ubiquitin-like modifier activating enzyme 3.	Cullin-3.	0.826
ENSENLP00000015432	LOC115057126	ENSENLP00000015432	ENSENLP00000050283	Ubiquitin-like modifier activating enzyme 3.	NEDD8-like.	0.966
ENSENLP00000015432	LOC115058487	ENSENLP00000015432	ENSENLP00000025903	Ubiquitin-like modifier activating enzyme 3.	NEDD8.	0.966
ENSENLP00000015432	UBA3	ENSENLP00000015432	ENSENLP00000010377	Ubiquitin-like modifier activating enzyme 3.	NEDD8-activating enzyme E1 catalytic subunit-like.	0.913
ENSENLP00000015432	cacul1	ENSENLP00000015432	ENSENLP00000007156	Ubiquitin-like modifier activating enzyme 3.	CDK2 associated cullin domain 1.	0.805
ENSENLP00000015432	cul1	ENSENLP00000015432	ENSENLP00000033221	Ubiquitin-like modifier activating enzyme 3.	Cullin 1.	0.876
ENSENLP00000015432	nae1	ENSENLP00000015432	ENSENLP00000053435	Ubiquitin-like modifier activating enzyme 3.	NEDD8 activating enzyme E1 subunit 1.	0.996
ENSENLP00000047986	CUL3	ENSENLP00000047986	ENSENLP00000006060	F-box protein 36a.	Cullin-3-like.	0.612