STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000049809Unconventional SNARE in the ER 1 homolog (S. cerevisiae). (250 aa)    
Predicted Functional Partners:
stx18
Syntaxin 18.
   
 0.999
LOC115053818
Vesicle transport protein SEC20-like.
    
 0.999
ykt6
YKT6 v-SNARE homolog.
    
 0.995
ENSENLP00000008216
Sorting nexin 15.
    
 0.994
rps6kc1
Ribosomal protein S6 kinase C1.
    
 0.994
stx5
Syntaxin 5.
    
 0.994
rint1
RAD50 interactor 1.
    
 0.991
ENSENLP00000012221
Zw10 kinetochore protein.
    
 0.989
nbas
NBAS subunit of NRZ tethering complex.
    
 0.989
LOC115058235
Vesicle-trafficking protein SEC22b-like.
    
 0.985
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.