STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aup1AUP1 lipid droplet regulating VLDL assembly factor. (414 aa)    
Predicted Functional Partners:
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 0.978
ube2g2
Ubiquitin conjugating enzyme E2 G2.
    
 
 0.971
AMFR
Autocrine motility factor receptor.
    
0.935
syvn1
Synoviolin 1.
    
 0.935
derl1
Derlin 1.
   
 
 0.933
sel1l3
SEL1L family member 3.
    
 0.928
LOC115056582
E3 ubiquitin-protein ligase AMFR-like.
    
 0.926
vhl
Von Hippel-Lindau tumor suppressor.
   
 
  0.921
LOC115052084
Derlin-2.
     
 0.903
LOC115049050
Derlin-2-like.
     
 0.903
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.