STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000050723Neutral sphingomyelinase (N-SMase) activation associated factor. (986 aa)    
Predicted Functional Partners:
ENSENLP00000011271
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.950
smpd2
Sphingomyelin phosphodiesterase 2.
     
 0.908
atg5
Autophagy related 5.
    
 0.883
atg12
Autophagy related 12.
    
 0.855
LOC115046743
Tumor necrosis factor receptor superfamily member 1A-like.
    
 0.828
plekhg6
Pleckstrin homology and RhoGEF domain containing G6.
    
 0.828
plekhg5
Pleckstrin homology and RhoGEF domain containing G5.
    
 0.828
rack1
Receptor for activated C kinase 1.
    
0.777
rpia
Ribose 5-phosphate isomerase A.
     
 0.729
rbsn
Rabenosyn, RAB effector.
     
 0.724
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.