STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgpatZinc finger CCCH-type and G-patch domain containing. (513 aa)    
Predicted Functional Partners:
ENSENLP00000012578
PRP3 pre-mRNA processing factor 3 homolog (yeast).
   
   0.826
e4f1
E4F transcription factor 1.
   
   0.773
prpf4
pre-mRNA processing factor 4.
    
   0.711
MARCHF6
Membrane associated ring-CH-type finger 6.
   
  
 0.543
LOC115057402
E3 ubiquitin-protein ligase MARCH6-like.
   
  
 0.543
ENSENLP00000011653
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
  
 0.533
arfrp1
ADP ribosylation factor related protein 1.
   
  
 0.526
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
   0.522
LOC115058860
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15-like.
   
   0.522
wdr53
WD repeat domain 53.
    
   0.516
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.