STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115058093Cerebellin-1-like. (199 aa)    
Predicted Functional Partners:
ENSENLP00000054052
annotation not available
    
  0.617
LOC115043124
Complement C1q subcomponent subunit C-like.
   
  0.584
ENSENLP00000000697
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.531
ENSENLP00000046062
Transformation/transcription domain-associated protein.
    
  0.531
ENSENLP00000025087
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
  0.530
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.528
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
  0.527
taf10
TATA-box binding protein associated factor 10.
    
  0.522
TADA1
Transcriptional adaptor 1.
    
  0.515
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.506
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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