STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
herc3HECT and RLD domain containing E3 ubiquitin protein ligase 3. (1048 aa)    
Predicted Functional Partners:
ENSENLP00000040962
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
  
  
 
0.871
LOC115058519
Cellular tumor antigen p53-like.
    
 0.817
LOC115051662
Ubiquitin-conjugating enzyme E2 L3-like.
   
 0.811
ENSENLP00000011583
annotation not available
   
  0.770
LOC115044059
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
  0.755
LOC115046577
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3-like.
    
  0.755
ENSENLP00000047345
Thyroid hormone receptor interactor 12.
   
 
0.740
ENSENLP00000014811
TSC complex subunit 2.
    
 0.714
ENSENLP00000000909
Tumor protein p73.
    
 0.689
tp63
Tumor protein p63.
    
 0.689
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.