STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSENLP00000054146annotation not available (173 aa)    
Predicted Functional Partners:
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 0.782
LOC115054444
Rab proteins geranylgeranyltransferase component A 1-like.
    
 0.754
gak
Cyclin G associated kinase.
    
 
 0.738
ankrd27
Ankyrin repeat domain 27.
    
 
 0.703
ENSENLP00000021918
Protein prenyltransferase alpha subunit repeat containing 1.
    
 0.670
hps1
HPS1 biogenesis of lysosomal organelles complex 3 subunit 1.
     
 0.596
ENSENLP00000004451
Zgc:112334.
    
 0.574
gdi1
GDP dissociation inhibitor 1.
    
 0.574
LOC115036956
Rab GDP dissociation inhibitor beta-like.
    
 0.574
ENSENLP00000025916
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 
 0.562
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.