STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sec24dSEC24 homolog D, COPII coat complex component. (1063 aa)    
Predicted Functional Partners:
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.997
LOC115045487
Protein transport protein Sec23B.
   
 0.994
sec23a
Sec23 homolog A, coat complex II component.
   
0.994
sec24c
SEC24 homolog C, COPII coat complex component.
  
0.987
ENSENLP00000034574
SEC24 homolog B, COPII coat complex component.
   
0.984
sec24a
SEC24 homolog A, COPII coat complex component.
   
0.984
ENSENLP00000034425
annotation not available
   
 0.982
LOC115059711
Protein transport protein Sec31A-like.
   
 0.979
ENSENLP00000024378
annotation not available
   
 0.973
SEC16A
SEC16 homolog A, endoplasmic reticulum export factor.
   
 0.971
Your Current Organism:
Echeneis naucrates
NCBI taxonomy Id: 173247
Other names: E. naucrates, live sharksucker
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.