STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO65842.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)    
Predicted Functional Partners:
KUO65843.1
acetyl-CoA decarbonylase/synthase complex subunit gamma; Part of a complex that catalyzes the cleavage of acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.993
KUO65840.1
acetyl-CoA decarbonylase/synthase complex subunit delta; Part of a complex that catalyzes the cleavage of acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.992
KUO65841.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.949
KUO65844.1
Bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; In acetogenic organisms, this enzyme complex converts carbon dioxide to acetyl-CoA while in methanogenic organisms this enzyme is used to degrade acetyl-CoA to form methane and carbon dioxide; part of an enzyme complex; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
KUO65845.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.906
KUO58326.1
acetyl-CoA synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.855
KUO65846.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.851
KUO65839.1
Methyltetrahydrofolate--corrinoid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.843
KUO66160.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
KUO65981.1
Methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
Your Current Organism:
Gracilibacter sp. BRHc7a
NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a
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