KUO64766.1 protein (Gracilibacter sp. BRHc7a)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KUO64766.1

Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (234 aa)

Predicted Functional Partners:

KUO64764.1

0.968

KUO64759.1

0.892

KUO64754.1

0.845

KUO64758.1

0.845

KUO64756.1

0.844

KUO64755.1

0.843

KUO64757.1

0.840

KUO64769.1

0.836

KUO64765.1

0.816

KUO64748.1

0.738

Your Current Organism:

Gracilibacter sp. BRHc7a

NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KUO64748.1	KUO64754.1	APF84_02620	APF84_02655	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
KUO64748.1	KUO64755.1	APF84_02620	APF84_02660	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
KUO64748.1	KUO64756.1	APF84_02620	APF84_02665	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
KUO64748.1	KUO64757.1	APF84_02620	APF84_02670	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.842
KUO64748.1	KUO64758.1	APF84_02620	APF84_02675	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.849
KUO64748.1	KUO64759.1	APF84_02620	APF84_02680	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.795
KUO64748.1	KUO64764.1	APF84_02620	APF84_02705	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.746
KUO64748.1	KUO64766.1	APF84_02620	APF84_02715	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
KUO64748.1	KUO64769.1	APF84_02620	APF84_02730	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
KUO64754.1	KUO64748.1	APF84_02655	APF84_02620	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
KUO64754.1	KUO64755.1	APF84_02655	APF84_02660	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
KUO64754.1	KUO64756.1	APF84_02655	APF84_02665	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
KUO64754.1	KUO64757.1	APF84_02655	APF84_02670	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.961
KUO64754.1	KUO64758.1	APF84_02655	APF84_02675	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
KUO64754.1	KUO64759.1	APF84_02655	APF84_02680	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.905
KUO64754.1	KUO64764.1	APF84_02655	APF84_02705	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KUO64754.1	KUO64766.1	APF84_02655	APF84_02715	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
KUO64754.1	KUO64769.1	APF84_02655	APF84_02730	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
KUO64755.1	KUO64748.1	APF84_02660	APF84_02620	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
KUO64755.1	KUO64754.1	APF84_02660	APF84_02655	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage head-tail adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965