KUO64768.1 protein (Gracilibacter sp. BRHc7a)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Textmining

[Homology]

Score

KUO64768.1

Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)

Predicted Functional Partners:

KUO64769.1

0.948

KUO64788.1

0.816

KUO64764.1

0.754

KUO64743.1

0.738

KUO64741.1

0.698

KUO64744.1

0.690

KUO64751.1

0.643

KUO64770.1

0.622

KUO64767.1

0.596

KUO64749.1

0.588

Your Current Organism:

Gracilibacter sp. BRHc7a

NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KUO64741.1	KUO64743.1	APF84_02585	APF84_02595	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	0.956
KUO64741.1	KUO64744.1	APF84_02585	APF84_02600	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
KUO64741.1	KUO64749.1	APF84_02585	APF84_02630	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
KUO64741.1	KUO64751.1	APF84_02585	APF84_02640	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.834
KUO64741.1	KUO64764.1	APF84_02585	APF84_02705	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
KUO64741.1	KUO64768.1	APF84_02585	APF84_02725	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698
KUO64741.1	KUO64769.1	APF84_02585	APF84_02730	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.561
KUO64741.1	KUO64788.1	APF84_02585	APF84_02735	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.565
KUO64743.1	KUO64741.1	APF84_02595	APF84_02585	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.956
KUO64743.1	KUO64744.1	APF84_02595	APF84_02600	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.925
KUO64743.1	KUO64749.1	APF84_02595	APF84_02630	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.887
KUO64743.1	KUO64751.1	APF84_02595	APF84_02640	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
KUO64743.1	KUO64764.1	APF84_02595	APF84_02705	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.702
KUO64743.1	KUO64768.1	APF84_02595	APF84_02725	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.738
KUO64743.1	KUO64788.1	APF84_02595	APF84_02735	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	Serine recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
KUO64744.1	KUO64741.1	APF84_02600	APF84_02585	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
KUO64744.1	KUO64743.1	APF84_02600	APF84_02595	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cytosine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.	0.925
KUO64744.1	KUO64749.1	APF84_02600	APF84_02630	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
KUO64744.1	KUO64751.1	APF84_02600	APF84_02640	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
KUO64744.1	KUO64764.1	APF84_02600	APF84_02705	Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Holin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750