STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO58755.1Metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
KUO58754.1
Cell shape determination protein CcmA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.898
KUO65071.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KUO59238.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
KUO57868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.617
KUO58249.1
Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.606
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.506
KUO60509.1
Cyanophycin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.459
KUO65010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.405
Your Current Organism:
Gracilibacter sp. BRHc7a
NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.