STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO64510.1Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
KUO64511.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KUO65001.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.764
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
  
 0.761
KUO58895.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.642
KUO65875.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.633
KUO60911.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.623
KUO65079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.516
KUO59009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.470
KUO66619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.448
KUO62521.1
Metal ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.444
Your Current Organism:
Gracilibacter sp. BRHc7a
NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.