KUO62220.1 protein (Gracilibacter sp. BRHc7a)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

KUO62220.1

Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)

Predicted Functional Partners:

KUO62219.1

0.839

KUO62221.1

0.793

APF84_12380

0.766

KUO57868.1

0.739

KUO66668.1

0.732

KUO62218.1

0.687

KUO57865.1

0.675

KUO66663.1

0.661

APF84_13570

0.655

KUO66665.1

0.636

Your Current Organism:

Gracilibacter sp. BRHc7a

NCBI taxonomy Id: 1734398
Other names: G. sp. BRH_c7a, Gracilibacter sp. BRH_c7a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APF84_12380	KUO62220.1	APF84_12380	APF84_12810	Recombinase domain-containing protein; Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.766
APF84_13570	KUO57865.1	APF84_13570	APF84_18380	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
APF84_13570	KUO57868.1	APF84_13570	APF84_18395	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
APF84_13570	KUO62218.1	APF84_13570	APF84_12800	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
APF84_13570	KUO62219.1	APF84_13570	APF84_12805	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.509
APF84_13570	KUO62220.1	APF84_13570	APF84_12810	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.655
APF84_13570	KUO66663.1	APF84_13570	APF84_03355	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.785
APF84_13570	KUO66665.1	APF84_13570	APF84_03365	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
APF84_13570	KUO66668.1	APF84_13570	APF84_03380	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.777
KUO57865.1	APF84_13570	APF84_18380	APF84_13570	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
KUO57865.1	KUO57868.1	APF84_18380	APF84_18395	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
KUO57865.1	KUO62218.1	APF84_18380	APF84_12800	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678
KUO57865.1	KUO62219.1	APF84_18380	APF84_12805	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
KUO57865.1	KUO62220.1	APF84_18380	APF84_12810	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.675
KUO57865.1	KUO66663.1	APF84_18380	APF84_03355	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.792
KUO57865.1	KUO66665.1	APF84_18380	APF84_03365	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.767
KUO57865.1	KUO66668.1	APF84_18380	APF84_03380	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.790
KUO57868.1	APF84_13570	APF84_18395	APF84_13570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
KUO57868.1	KUO57865.1	APF84_18395	APF84_18380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.922
KUO57868.1	KUO62218.1	APF84_18395	APF84_12800	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.684